Difference between revisions of "Template:Leishmania Major File Updates"

Revision as of 06:26, 12 December 2013

1. 11/5/2013
   • Media:A-GEOD-6855.adf_A.txt Array Design File
   • Media:E-GEOD-10407.idf_A.txt Investigation Description File
   • Media:E-GEOD-10407.processed.1_A.zip Processed Data
   • Media:E-GEOD-10407.raw.1_A.zip Raw Data
   • Media:E-GEOD-10407.sdrf_A.txt Sample and Data Relationship File
2. 11/7/2013
   • Media:E-GEOD-10407.sdrf_B.txt Leishmania major Chips
   • Completed Import/Export Cycle, conducted a Tally Count, opened .gdb file in Microsoft Access and compared original row counts.
   • Access was missing 2 genes for GeneID and RefSeq, and we had no GO terms in the Tally or in Access.
3. 11/11/2013
   • Leishmania major Genome Reference Article Presentation
4. 11/14/13
   • Media:E-GEOD-10407.sdrf_C.txt Edited Sample and Data (Ordered based on species and relevant data)
   • Media:L.majorCompiledRawData.txt L. major raw compiled data
   • Media:L.infantumCompliedRawData(A).txt L. infantum raw compiled data
5. 11/19/2013:
   • Media:L.majorCompiledRawData_B.txt L. major raw compiled data with adjusted dye swap values
   • Media:L.infantumCompliedRawData(B).txt L. infantum raw compiled data with adjusted dye swap values and sample names
   • Media:L.majorCompiledRawData_C.txt L. major raw compiled data with adjusted dye swap values and sample names
6. 11/21/2013
   • Media:L.infantumStats.txt
   • Media:L.infantumStats.xls
   • File:L.majorStats.xls
   • File:L.majorStats.txt
   • File:L.majorStats(A).txt
   • File:L.infantumStats(A).txt
   • File:LeishmaniaCompiledStatAnalysis.txt
7. 12/3/2013
   • File:LeishmaniaCompiledStatAnalysis(A).txt
   • File:LeishmaniaCompiledStatAnalysis(A).EX.txt
   • Media:L.infantumStats_B.xls Fixed infantum p-value parenthesis
   • Media:LeishmaniaCompiledStatAnalysis(B).txt
   • Media:LeishmaniaCompiledStatAnalysisLMJFiltered.txt Original File That should work in GenMAPP once coding is fixed
   • Media:LeishmaniaCompiledStatAnalysisLMJFiltered(B).txt Quick fix file with underscores to work in GenMAPP until coding is fixed
   • Media:LeishmaniaCompiledStatAnalysisLMJFiltered(B).EX.txt
   • Media:LeishmaniaCompiledStatAnalysisLMJFiltered(B).gex
   • Media:ExceptionFileErrorID.txt
   • Leishmania Major Group Project Report
   • Media:Dist Leishmania Lena Gabe 05112013.zip
8. 12/5/2013
   • Media:LeishmaniaGDB Lena Gabe 20131205.zip
9. 12/7/2013
   • File:LMajorGOMapp-Criterion1-GO.txt
   • File:LMajorGOMapp-Criterion0-GO.txt
10. 12/11/2013
    • Media:Leishmania schema 20101022.pdf