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- 23:22, 13 December 2013 Stephen Louie Deliverables (hist) [2,194 bytes] Slouie (Talk | contribs) (added content)
- 22:43, 13 December 2013 Tauras' Assessment and Reflection (hist) [9,213 bytes] Taur.vil (Talk | contribs) (start of page and some files)
- 21:59, 13 December 2013 TATK Final Group Deliverables (hist) [1,227 bytes] Taur.vil (Talk | contribs) (Page Creation minus group report file)
- 21:48, 13 December 2013 Miles Malefyt deliverables (hist) [2,979 bytes] Mmalefyt (Talk | contribs) (Created page with "==Statement of work==")
- 18:53, 13 December 2013 Alina's Assessment and Reflection (hist) [6,801 bytes] Ajvree (Talk | contribs) (initial format)
- 11:44, 13 December 2013 Team H(oo)KD Final Project Deliverables (hist) [2,040 bytes] Ksherbina (Talk | contribs) (Added template)
- 07:33, 13 December 2013 Streptococcus pneumoniae TIGR4 20131125 GeneTestingReport (hist) [5,078 bytes] Taur.vil (Talk | contribs) (new page name)
- 03:24, 13 December 2013 Personal Assessment (hist) [346 bytes] Lena (Talk | contribs) (Created page with "Media:Leishmania PersonalAssesment 12122013 Hunt.pdf")
- 19:12, 12 December 2013 Kevin's Assessment and Reflection (hist) [4,281 bytes] Kmeilak (Talk | contribs) (Created page with "==Statement of Work== I compiled the raw data into one excel file 20131119_teamATK_KM_compiledrawdata.xls")
- 06:33, 12 December 2013 Kevin McGee Assessment and Reflection (hist) [7,588 bytes] Kevinmcgee (Talk | contribs) (Created page with "Statement of Work Describe exactly what you did on the project. Kevinmcgee Week 10 # #*I used the PubMed database to find the reference geneome of Leishmania Major. #*I se...")
- 00:24, 12 December 2013 Laurmagee: Individual Assessment (hist) [10,772 bytes] Laurmagee (Talk | contribs) (Added Assessment Format)
- 23:37, 11 December 2013 Team Name Deliverables (hist) [2,428 bytes] Slouie (Talk | contribs) (Started on deliverables page)
- 10:51, 11 December 2013 Vkuehn Individual Assessment and Reflection (hist) [6,196 bytes] Vkuehn (Talk | contribs) (Created page with "=== Statement of Work === * Describe exactly what you did on the project. * Provide references or links to artifacts of your work, such as: ** Wiki pages ** Other files or do...")
- 01:23, 11 December 2013 Final Project Deliverables (hist) [1,086 bytes] Lena (Talk | contribs) (Created page with " GenMAPP Gene Database for assigned species (.gdb) ReadMe file to accompany the Gene Database (.pdf) Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip Include ...")
- 23:44, 10 December 2013 Individual Assessment and Reflection (hist) [3,426 bytes] Mpetredi (Talk | contribs) (added some responses to individual assessment and reflection)
- 19:02, 5 December 2013 Teamname Week 15 Status Report (hist) [2,428 bytes] Laurmagee (Talk | contribs) (Created page with "=='''Team Name'''== =='''Lauren Magee''': Reflection Questions==")
- 18:56, 5 December 2013 Leishmania major Week 15 Status Report (hist) [2,701 bytes] Vkuehn (Talk | contribs) (week 15 made)
- 18:29, 5 December 2013 Kmeilak Week 15 (hist) [19,031 bytes] Kmeilak (Talk | contribs) (Created page with "==Electronic Lab Journal== == Map Onto Biological Pathways (GenMAPP & MAPPFinder) == '''Fall 2013:''' Beginning point for class on Tuesday, October 15 as part of the [https...")
- 18:17, 5 December 2013 Team H(oo)KD Week 15 Status Report (hist) [6,248 bytes] Ksherbina (Talk | contribs) (Added template)
- 18:14, 5 December 2013 Vkuehn Week 15 (hist) [3,023 bytes] Vkuehn (Talk | contribs) (Created page with "=='''ELECTRONIC NOTEBOOK'''== ==12/5/13== ===Sanity Check=== *P-value less than 0.05: 5303 *P-value less that 0.01: 2130 *P-value less that 0.001: 317 *P-value less that 0.00...")
- 18:13, 5 December 2013 Kmeilak Week 14 (hist) [10,626 bytes] Kmeilak (Talk | contribs) (Created page with "==Electronic Lab Notebook== ===11/29/13=== *Continued to manipulate raw data as described here [http://www.openwetware.org/wiki/BIOL398-01/S10:Sample_Microarray_Analysis_Vib...")
- 18:02, 5 December 2013 Kevinmcgee Week 15 (hist) [1,812 bytes] Kevinmcgee (Talk | contribs) (Added Sanity Check)
- 17:47, 5 December 2013 Taur.vil Week 15 (hist) [794 bytes] Taur.vil (Talk | contribs) (Created page and started inputting information)
- 19:10, 3 December 2013 Ajvree Week 15 (hist) [1,384 bytes] Ajvree (Talk | contribs) (excel comparison info)
- 19:03, 3 December 2013 Leishmania Major Group Project Report (hist) [1,606 bytes] Lena (Talk | contribs) (Created page with "'''Methods''' :'''Data Source Files''' :The Uniprot XML proteome set was downloaded from the Uniprot complete proteomes page for Leishmania major. We used the version that w...")
- 18:50, 3 December 2013 Gleis Week 15 (hist) [789 bytes] Gleis (Talk | contribs) (Created page with "==Lab Journal== *Code needed ID changes in Eclipse *Replaced first period with an "_" and removed second "_" *Replaced to look like "LMJF_##_####"")
- 18:28, 3 December 2013 Laurmagee: Week 15 (hist) [17,836 bytes] Laurmagee (Talk | contribs) (Added Sanity)
- 18:23, 3 December 2013 Electronic notebook: sinorhizobium meliloti (hist) [3,799 bytes] Mmalefyt (Talk | contribs) (Created page with "==Week 12== *Read the paper on the salinity and sucrose stress on gene expression *Sorted the raw data into an XML file")
- 18:03, 3 December 2013 TATK Week 15 Status Report (hist) [1,216 bytes] Kmeilak (Talk | contribs) (Created page with "==12/3/13== *numbers of significant p-values by hour for TIGR4 #4hr - 1218 #")
- 17:08, 3 December 2013 Mpetredi Week 14 (hist) [974 bytes] Mpetredi (Talk | contribs) (notes about new string of code and start of new import/export process)
- 19:13, 26 November 2013 Gleis Week 14 (hist) [839 bytes] Gleis (Talk | contribs) (Created page with "==To Do List== *Identify new URL pattern *Fix import/export issues *Fix ID code *Tally Engine code not showing Ordered Locus")
- 18:50, 26 November 2013 Ajvree Week 14 (hist) [602 bytes] Ajvree (Talk | contribs) (og row counts, template)
- 06:58, 26 November 2013 Taur.vil Week 14 (hist) [649 bytes] Taur.vil (Talk | contribs) (IE C4)
- 06:57, 26 November 2013 TATK E4: TIGR4 Testing Report (hist) [5,078 bytes] Taur.vil (Talk | contribs) (started up til export)
- 01:04, 22 November 2013 Team H(oo)KD Week 13 Status Report (hist) [7,866 bytes] Ksherbina (Talk | contribs) (Added template)
- 20:35, 21 November 2013 Laurmagee: Week 13 (hist) [3,237 bytes] Laurmagee (Talk | contribs) (Created page with "The following link is to the Sinorhizobium meliloti team page: Team Name * ~~~~ Category: Journal EntryCategory: Sinorhizobium meliloti")
- 19:29, 21 November 2013 Teamname Week 13 Status Report (hist) [4,764 bytes] Laurmagee (Talk | contribs) (Created page with "=='''Team Name'''== =='''Lauren Magee''': Reflection Questions== Category:Journal Entry")
- 05:49, 21 November 2013 TATK Week 13 Status Report (hist) [3,001 bytes] Kmeilak (Talk | contribs) (Created page with "===Week Goals and Status Report=== 1. ===Next Steps=== ===Goals for Next Week=== ===Deliverables=== ====Group==== ====Individuals==== ===Team Reflections===")
- 05:26, 21 November 2013 TATK E3: TIGR4 Testing Report (hist) [5,402 bytes] Taur.vil (Talk | contribs) (start of IE cycle)
- 18:32, 19 November 2013 Kmeilak Week 13 (hist) [804 bytes] Kmeilak (Talk | contribs) (Created page with "==Electronic Lab Notebook== ===11/19/2013=== *Created compiled raw data file using the following steps #Opened first of 18 raw data files in excel #Opened blank excel sprea...")
- 18:28, 19 November 2013 Gleis Week 13 (hist) [688 bytes] Gleis (Talk | contribs) (Created page with "==Lab Journal== *Identified database link pattern: :*http://www.genedb.org/gene/~ *Customized species profile :*Linked Ordered Locus Names to ORF :*Updated Species Database Li...")
- 18:18, 19 November 2013 Leishmania major Week 13 Status Report (hist) [3,358 bytes] Gleis (Talk | contribs) (Created page with "==Import/Export GenMAPP== Name:Leishmania_major_18112013 ===Export Information=== :Uniprot: : :GO OBO: : :GOA: : ===Tally Engine=== ===Original Row Counts Comparison===")
- 18:02, 19 November 2013 Ajvree Week 13 (hist) [3,806 bytes] Ajvree (Talk | contribs) (began week 13 counting info)
- 17:59, 19 November 2013 Mpetredi Week 13 (hist) [1,602 bytes] Mpetredi (Talk | contribs) (added links to model organism database)
- 17:42, 19 November 2013 Mpetredi Week 12 (hist) [297 bytes] Mpetredi (Talk | contribs) (added info about week 12 assignment)
- 17:41, 19 November 2013 Kevinmcgee Week 13 (hist) [1,853 bytes] Kevinmcgee (Talk | contribs) (Began electronic journal)
- 17:34, 19 November 2013 Data Information (hist) [2,792 bytes] Kmeilak (Talk | contribs) (Created page with "==corresponding data files to ID and sample excel file== *GSM664117_14090187_control_Cy3_48_hr_Cy5 = 48hr_Cy5_control_Cy3_1")
- 09:25, 19 November 2013 Vkuehn Week 13 (hist) [2,570 bytes] Vkuehn (Talk | contribs) (created page)
- 06:54, 19 November 2013 Taur.vil Week 13 (hist) [3,849 bytes] Taur.vil (Talk | contribs) (TIGR4 E2)
- 06:52, 19 November 2013 TATK E2: TIGR4 Testing Report (hist) [3,965 bytes] Taur.vil (Talk | contribs) (started page TIGR4 E2)
- 17:39, 18 November 2013 TATK Export One: TIGR4 Testing Report (hist) [5,183 bytes] Taur.vil (Talk | contribs) (Filled out information for Export)
- 08:03, 15 November 2013 Vkuehn Week 12 (hist) [1,541 bytes] Vkuehn (Talk | contribs) (Week 12 electronic notebook)
- 05:07, 15 November 2013 TATK Week 12 Status Report (hist) [5,999 bytes] Taur.vil (Talk | contribs) (Tauras' Reflection on week 12 status report)
- 04:57, 15 November 2013 Stephen Louie Project Notebook (hist) [3,278 bytes] Slouie (Talk | contribs) (Created Project Notebook)
- 18:46, 14 November 2013 Team Journal Assignment Week 12 (hist) [509 bytes] HDelgadi (Talk | contribs) (added signature)
- 18:42, 14 November 2013 Team H(oo)KD Week 12 Individual Status Reports (hist) [131 bytes] Dwilliams (Talk | contribs) (Created Week 12 Individual Status Report Page)
- 18:39, 14 November 2013 Team ATK Week 12 Progress Report (hist) [1,245 bytes] Kmeilak (Talk | contribs) (Created page with "=='''Kevin Meilak'''== ===11/12/13=== *In class presentations took up the entire work day, no direct project work done ===11/14/13=== *Reread materials and met...")
- 18:37, 14 November 2013 Kevinmcgee Week 12 (hist) [775 bytes] Kevinmcgee (Talk | contribs) (Added image)
- 18:29, 14 November 2013 H(oo)KD Week 12 Status Report (hist) [130 bytes] HDelgadi (Talk | contribs) (adding signature and linking team page)
- 18:25, 14 November 2013 Dwilliams Project Notebook (hist) [8,419 bytes] Dwilliams (Talk | contribs) (Added weeks to notebook)
- 18:23, 14 November 2013 DwilliamsProject Notebook (hist) [24 bytes] Dwilliams (Talk | contribs) (Added weeks to notebook)
- 18:09, 14 November 2013 Ajvree Week 12 (hist) [716 bytes] Ajvree (Talk | contribs) (began Access counting)
- 17:53, 14 November 2013 Leishmania major Week 12 Status Report (hist) [4,495 bytes] Lena (Talk | contribs) (Created page with "Status Report")
- 17:48, 14 November 2013 Gleis Week 12 (hist) [1,342 bytes] Gleis (Talk | contribs) (Created page with "Eclipse>workbench>+canister>follow coder instructions")
- 17:42, 14 November 2013 HDelgadi Project Notebook (hist) [8,546 bytes] HDelgadi (Talk | contribs) (week 12,13,14)
- 17:36, 14 November 2013 Lena Project Notebook (hist) [5,456 bytes] Lena (Talk | contribs) (added weeks)
- 17:27, 14 November 2013 Kmeilak Week 12 (hist) [1,857 bytes] Kmeilak (Talk | contribs) (Created page with "==Electronic Lab Journal== ===11/12/13=== In class presentations took up the entire work day, no direct project work done. ===11/14/13===")
- 04:55, 14 November 2013 Taur.vil Week 12 (hist) [4,245 bytes] Taur.vil (Talk | contribs) (G54 initial gmBuilder run)
- 04:23, 14 November 2013 Ksherbina Project Notebook (hist) [28,892 bytes] Ksherbina (Talk | contribs) (Added sections and template)
- 20:44, 13 November 2013 Laurmagee: Week 12 (hist) [812 bytes] Laurmagee (Talk | contribs) (Created page with "Category: Journal EntryCategory: Team Name")
- 20:32, 13 November 2013 Team Name Week 12 (hist) [3,730 bytes] Laurmagee (Talk | contribs) (Created page with "===Team Name=== ==Lauren Magee: Reflection Questions== # What were the week’s key accomplishments? # What are next week’s target accomplishments? # What team strengths...")
- 02:02, 12 November 2013 Dwilliams Week 11 assignment (hist) [15,121 bytes] Dwilliams (Talk | contribs) (Created Week 11 Assignment Page)
- 01:58, 12 November 2013 Genome paper Sinorhizonium Meliloti (hist) [6,561 bytes] Mmalefyt (Talk | contribs) (Created page with "==Terms== *'''Megaplasmid''' - Genomic material that is not found in the chromosome that contains 100kb or more of information. Usually found in highly diverse species of bact...")
- 22:59, 11 November 2013 HDelgadi Week 11 (hist) [9,972 bytes] HDelgadi (Talk | contribs) (adding definition title)
- 19:50, 11 November 2013 Mpetredi Week 11 (hist) [10,356 bytes] Mpetredi (Talk | contribs) (added categories)
- 05:00, 11 November 2013 Kevinmcgee Week 11 (hist) [4,878 bytes] Kevinmcgee (Talk | contribs) (Added unknown terms)
- 22:06, 10 November 2013 Kmeilak Week 11 (hist) [7,457 bytes] Kmeilak (Talk | contribs) (Created page with "==Preparation for Journal Club on Streptococcus pneumoniae== ===10 novel biological terms=== #isolate - #lactococci - #beta-hemolytic - #otitis media - #spoolings - #fo...")
- 03:24, 10 November 2013 Vkuehn Week 11 (hist) [11,900 bytes] Vkuehn (Talk | contribs) (Created page, outlined intro)
- 21:59, 8 November 2013 Ksherbina Week 11 (hist) [14,545 bytes] Ksherbina (Talk | contribs) (Added template)
- 01:02, 8 November 2013 Team H(oo)KD Week 12 Status Report (hist) [2,449 bytes] Ksherbina (Talk | contribs) (Added description of page and sections) originally created as "Team H(oo)KD Electronic Lab Notebook"
- 18:44, 7 November 2013 Stephen Louie Week 11 (hist) [8,543 bytes] Slouie (Talk | contribs) (Added terms)
- 18:12, 7 November 2013 Laurmagee: Week 11 (hist) [7,362 bytes] Laurmagee (Talk | contribs) (Template for Jounral)
- 17:49, 7 November 2013 Gleis Week 11 (hist) [9,095 bytes] Gleis (Talk | contribs) (Created page with "==GO Terms==")
- 17:47, 7 November 2013 Ajvree Week 11 (hist) [7,360 bytes] Ajvree (Talk | contribs) (strain ids)
- 17:37, 7 November 2013 Lena Week 11 (hist) [10,023 bytes] Lena (Talk | contribs) (Created page with "'''The Genome of the Kinetoplastid Parasite, ''Leishmania major.'' '''")
- 18:42, 5 November 2013 The Plan (hist) [1,655 bytes] Vkuehn (Talk | contribs) (Created timeline page)
- 18:27, 5 November 2013 Individual hw week 10 (hist) [2,512 bytes] Mmalefyt (Talk | contribs) (Created page with "==Class Notes week 10== *To access database pages go through the LMU link *journal availibility comes through PubMed central if it is funded by the government ==Open Access J...")
- 18:04, 5 November 2013 Taur.vil Week 11 (hist) [10,668 bytes] Taur.vil (Talk | contribs) (creating and proj manager meeting)
- 17:50, 5 November 2013 Team Name (hist) [11,998 bytes] Slouie (Talk | contribs) (Edited Team page)
- 17:47, 5 November 2013 In Class Notes Week 11 (hist) [144 bytes] Dwilliams (Talk | contribs) (Added Notes for week 11)
- 01:42, 1 November 2013 HDelgadi Week 10 (hist) [2,080 bytes] HDelgadi (Talk | contribs) (updating electronic notebook)
- 17:27, 31 October 2013 Leishmania Major Articles (hist) [7,807 bytes] Kevinmcgee (Talk | contribs) (Added articles to page)
- 17:25, 31 October 2013 Leishmania Marjor Articles (hist) [0 bytes] Kevinmcgee (Talk | contribs) (Added articles to page)
- 17:12, 31 October 2013 Taur.vil Week 10 (hist) [5,992 bytes] Taur.vil (Talk | contribs) (journal through first paper)
- 17:10, 31 October 2013 Stephen Louie Week 10 (hist) [1,447 bytes] Slouie (Talk | contribs) (Added lab notebook)
- 16:52, 31 October 2013 Dwilliams Week 10 assignment (hist) [3,452 bytes] Dwilliams (Talk | contribs) (Created page with "==Electronic Journal Week 10==")
- 00:51, 31 October 2013 Ksherbina Week 10 (hist) [6,874 bytes] Ksherbina (Talk | contribs) (Added categories)
- 08:14, 30 October 2013 Laurmagee: Week 10 (hist) [3,925 bytes] Laurmagee (Talk | contribs) (Articles)
- 17:43, 29 October 2013 Kevinmcgee Week 10 (hist) [1,854 bytes] Kevinmcgee (Talk | contribs) (Created page with "# #*I used the PubMed database to find the reference geneome of Leishmania Major. #*I searched with the terms "Leishmania Major [MeSH Terms] AND Genome [Title]" #*The search t...")
- 17:19, 29 October 2013 Mpetredi Week 10 (hist) [4,359 bytes] Mpetredi (Talk | contribs) (added name and categories)