User contributions
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- 19:47, 27 September 2016 (diff | hist) . . (+1) . . Main Page (→Announcements: commented out class locations) (top)
- 19:47, 27 September 2016 (diff | hist) . . (+7) . . Main Page (→Announcements: commented out old announcements)
- 17:42, 16 June 2015 (diff | hist) . . (+1) . . Running GenMAPP Builder (→GOA: fixed vibrio link) (top)
- 17:32, 16 June 2015 (diff | hist) . . (+2) . . Running GenMAPP Builder (→GOA: fixed ftp link to http for GOA proteomes page)
- 19:50, 2 May 2014 (diff | hist) . . (+1,326) . . User:Kdahlquist (→GOA: added in "in progress" species) (top)
- 22:48, 15 December 2013 (diff | hist) . . (+249) . . User talk:Dondi (note about fixing link on Team H(oo)KD's page) (top)
- 22:45, 15 December 2013 (diff | hist) . . (+18) . . Team H(oo)KD Final Project Deliverables (fixed link to EB to RB with rif decreased) (top)
- 19:34, 10 December 2013 (diff | hist) . . (-7) . . Main Page (→Grades Posted: changes week 7 to remind them to pick up feedback)
- 19:33, 10 December 2013 (diff | hist) . . (-61) . . Main Page (→Class Locations: deleted old locations)
- 19:32, 10 December 2013 (diff | hist) . . (+361) . . Main Page (→Grades Posted: week 10 team pages posted)
- 19:32, 5 December 2013 (diff | hist) . . (+472) . . Main Page (→Seminars and Events: one last seminar)
- 00:43, 27 November 2013 (diff | hist) . . (+38) . . User:Kdahlquist (→New gdb exports: uploaded msmeg gdb')
- 00:43, 27 November 2013 (diff | hist) . . (+49) . . N File:Ms-Std External 20131125.zip (Mycobacterium smegmatis gdb exported with gmb2b71) (top)
- 00:42, 27 November 2013 (diff | hist) . . (+43) . . User:Kdahlquist (→New gdb exports: tally engine for msmeg)
- 00:42, 27 November 2013 (diff | hist) . . (+59) . . N File:Ms TallyEngine 20131125.jpg (tallyengine results for mycobacterium smegmatis and gmb2b71) (top)
- 00:37, 27 November 2013 (diff | hist) . . (+69) . . User:Kdahlquist (→New gdb exports: posted Plasmodium gdb)
- 00:36, 27 November 2013 (diff | hist) . . (+47) . . N File:Pf-Std External 20131125.zip (Plasmodium falciparum gdb exported with gmb2b71) (top)
- 00:34, 27 November 2013 (diff | hist) . . (+43) . . User:Kdahlquist (→New gdb exports: pasted in plasmodium tallyengine results)
- 00:34, 27 November 2013 (diff | hist) . . (+55) . . N File:Pf TallyEngine 20131125.jpg (screenshot of tallyengine for Plasmodium falciparum gdb) (top)
- 00:14, 27 November 2013 (diff | hist) . . (+2,274) . . Talk:Team Name (pasted in e-mail to lauren) (top)
- 23:46, 26 November 2013 (diff | hist) . . (+99) . . Talk:Team Name (→Feedback for Miles: replaced signature wiht wiki signature)
- 23:46, 26 November 2013 (diff | hist) . . (+1,860) . . N Talk:Team Name (copy of e-mail to miles)
- 22:49, 26 November 2013 (diff | hist) . . (0) . . Gene Database Project (→Group: replaced link to Vibrio Readme with new file)
- 22:48, 26 November 2013 (diff | hist) . . (+57) . . N File:ReadMe Vc-Std External 20131122.zip (Sample ReadMe file based on Vibrio cholerae Gene Database) (top)
- 21:22, 26 November 2013 (diff | hist) . . (+1,217) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: updated the procedure that Dillon and I worked out in office hours) (top)
- 21:14, 26 November 2013 (diff | hist) . . (+190) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: comparisons and replicates)
- 20:45, 26 November 2013 (diff | hist) . . (+348) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: link to file from office hours)
- 20:42, 26 November 2013 (diff | hist) . . (+185) . . Chlamydia trachomatis (→Important Files: link to edited data file)
- 20:41, 26 November 2013 (diff | hist) . . (+40) . . N File:Master Spreadsheet Chlamydia 20131125 KD.xls (edited during office hours to demo stats) (top)
- 19:13, 26 November 2013 (diff | hist) . . (-21) . . Coder (→Milestone 1: removed extra GenMAPP URL reference) (top)
- 19:12, 26 November 2013 (diff | hist) . . (+551) . . Coder (→Milestone 1: put in more specific instructions for downloading genmapp)
- 19:11, 26 November 2013 (diff | hist) . . (+331) . . Main Page (→Announcements: put installing GenMAPP announcement back)
- 00:13, 26 November 2013 (diff | hist) . . (+772) . . Talk:Chlamydia trachomatis (gave feedback on week 13 status)
- 23:14, 25 November 2013 (diff | hist) . . (+73) . . User:Kdahlquist (→New gdb exports: link to H pylori gdb)
- 23:13, 25 November 2013 (diff | hist) . . (+55) . . N File:Hp-Std External 20131122.zip (Helicobacter pylori Gene Database exported with gmb2b71) (top)
- 23:13, 25 November 2013 (diff | hist) . . (+39) . . User:Kdahlquist (→New gdb exports: added Hp tallyengine screenshot)
- 23:12, 25 November 2013 (diff | hist) . . (+58) . . N File:Hp TallyEngine 20131122.jpg (Screenshot of TallyEngine for Hp-Std_External_20131122.gdb) (top)
- 17:44, 25 November 2013 (diff | hist) . . (+39) . . User:Kdahlquist (→New gdb exports: screenshot of tallyengine for vibrio database)
- 17:43, 25 November 2013 (diff | hist) . . (+85) . . N File:TallyEngine Vc 20131122.jpg (Screenshot of TallyEngine for exported database Vc-Std_External_20131122_attempt2.gdb) (top)
- 17:38, 25 November 2013 (diff | hist) . . (+116) . . User:Kdahlquist (new section for gdb exports; link to V. cholerae)
- 17:37, 25 November 2013 (diff | hist) . . (+39) . . N File:Vc-Std External 20131122 attempt2.zip (export of V. cholerae gdb using gmb2b71) (top)
- 17:06, 25 November 2013 (diff | hist) . . (-1) . . m User:Kdahlquist (→UniProt XML: removed stray ])
- 23:32, 21 November 2013 (diff | hist) . . (+2) . . Main Page (→Grades Posted: changed level of header)
- 23:32, 21 November 2013 (diff | hist) . . (+85) . . Main Page (→Class Locations: note about final presentations in classroom)
- 23:31, 21 November 2013 (diff | hist) . . (-195) . . Main Page (→Seminars and Events: deleted old seminar)
- 20:00, 21 November 2013 (diff | hist) . . (-24) . . Gene Database Project Report Guidelines (removed under construction notice)
- 19:59, 21 November 2013 (diff | hist) . . (+137) . . Gene Database Project Report Guidelines (→Group Report: adding acknowledgment section)
- 19:58, 21 November 2013 (diff | hist) . . (-92) . . Gene Database Project Report Guidelines (→References: fixed link to literature citations guideline)
- 19:57, 21 November 2013 (diff | hist) . . (+88) . . Gene Database Project Report Guidelines (→Individual Assessment and Reflection: clarified each person does this)
- 19:56, 21 November 2013 (diff | hist) . . (+82) . . Gene Database Project Report Guidelines (noted contributions from all member, lowered level of style sheet heading)
- 19:55, 21 November 2013 (diff | hist) . . (+31) . . Gene Database Project Report Guidelines (→Discussion: added discussing stats)
- 19:54, 21 November 2013 (diff | hist) . . (+222) . . Gene Database Project Report Guidelines (→Results: added narrative description)
- 19:53, 21 November 2013 (diff | hist) . . (+10) . . Gene Database Project Report Guidelines (→Methods: emphasized narrative description)
- 19:52, 21 November 2013 (diff | hist) . . (+42) . . Gene Database Project Report Guidelines (→Style Sheet: added course number and title of class to title page)
- 19:52, 21 November 2013 (diff | hist) . . (-195) . . Gene Database Project Report Guidelines (→Methods: deleted old references to Integr8 and old GO download page)
- 18:55, 21 November 2013 (diff | hist) . . (+76) . . Week 13 (changed team reflection; removed under construction) (top)
- 23:35, 20 November 2013 (diff | hist) . . (+181) . . Talk:Streptococcus pneumoniae (→GenMAPP User: note to get this done by Tuesday) (top)
- 23:34, 20 November 2013 (diff | hist) . . (+1,070) . . Talk:Streptococcus pneumoniae (→GenMAPP User: completed feedback)
- 23:28, 20 November 2013 (diff | hist) . . (+687) . . Talk:Streptococcus pneumoniae (→GenMAPP User: ordering samples, data values, replicates)
- 23:24, 20 November 2013 (diff | hist) . . (+449) . . Talk:Streptococcus pneumoniae (→GenMAPP User: delete redundant ID columns)
- 23:20, 20 November 2013 (diff | hist) . . (+48) . . Talk:Streptococcus pneumoniae (started week 13 feedback for GenMAPP user)
- 17:04, 20 November 2013 (diff | hist) . . (+74) . . Main Page (→Seminars and Events: added title of Carmona talk)
- 22:11, 19 November 2013 (diff | hist) . . (-225) . . Main Page (→Seminars and Events: deleted old seminar announcement)
- 17:15, 15 November 2013 (diff | hist) . . (+3,059) . . Talk:Streptococcus pneumoniae (pasted in e-mail from 11/15/13 to team)
- 17:03, 15 November 2013 (diff | hist) . . (+74) . . N Category:Streptococcus pneumoniae (added description) (top)
- 16:44, 15 November 2013 (diff | hist) . . (+9) . . Main Page (→Class Locations: lab for rest of semester)
- 16:44, 15 November 2013 (diff | hist) . . (-531) . . Main Page (→Seminars and Events: removed old notices)
- 18:27, 14 November 2013 (diff | hist) . . (0) . . File:E-MEXP-785.sdrf.txt (Kdahlquist uploaded a new version of "File:E-MEXP-785.sdrf.txt": new version of file from Dr. Dahlquist) (top)
- 00:20, 14 November 2013 (diff | hist) . . (+6) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: fixed link syntax)
- 00:20, 14 November 2013 (diff | hist) . . (+2) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: fixed link syntax)
- 00:19, 14 November 2013 (diff | hist) . . (+241) . . Talk:Chlamydia trachomatis (→GenMAPP User Notes: link to cdf file and dChip web site)
- 00:18, 14 November 2013 (diff | hist) . . (+110) . . N File:GPL4692.cdf.gz (CDF file for Affymetrix RML Custom Pathogenic chip 3 needed by Team H(oo)KD for the Chlamydia trachomatis data) (top)
- 00:16, 14 November 2013 (diff | hist) . . (+28) . . Talk:Chlamydia trachomatis (new section for GenMAPP User Notes)
- 23:51, 11 November 2013 (diff | hist) . . (+385) . . Main Page (→Announcements: grades for week 7 assignment posted)
- 22:59, 11 November 2013 (diff | hist) . . (-44) . . Main Page (→Class Locations: del old loc)
- 22:59, 11 November 2013 (diff | hist) . . (-206) . . Main Page (→Seminars and Events: del old sem)
- 20:47, 11 November 2013 (diff | hist) . . (+297) . . Main Page (→Seminars and Events: added cte event on 11/14)
- 18:45, 6 November 2013 (diff | hist) . . (0) . . Quality Assurance (→Milestones: fixed capitalization for GeneID)
- 18:44, 6 November 2013 (diff | hist) . . (+8) . . Coder (commented out redlink to beta 60 release.zip)
- 18:42, 6 November 2013 (diff | hist) . . (-127) . . GenMAPP User (→Milestone 1: deleted correspondence item because it's found in milestone 2)
- 18:41, 6 November 2013 (diff | hist) . . (+183) . . GenMAPP User (→Milestone 1: added create table for correspondence between data and samples)
- 18:38, 6 November 2013 (diff | hist) . . (+7) . . Project Manager (→Milestone 2: clarified that status reports are ongoing for rest of semester) (top)
- 18:37, 6 November 2013 (diff | hist) . . (-1) . . Week 11 (fixed days referred to on due date)
- 18:36, 6 November 2013 (diff | hist) . . (+909) . . Week 11 (→Team Wiki Pages: clarified what is expected on team wiki pages)
- 00:44, 6 November 2013 (diff | hist) . . (+30) . . User:Kdahlquist (→GOA: version for vibrio file)
- 00:43, 6 November 2013 (diff | hist) . . (+101) . . User:Kdahlquist (→GOA: download link for vibrio)
- 00:42, 6 November 2013 (diff | hist) . . (+118) . . User:Kdahlquist (→GOA: link to staph file)
- 00:41, 6 November 2013 (diff | hist) . . (+65) . . N File:19583.S aureus MRSA252 20131105.goa (GOA file for Staphylococcus aureus version 10/15/2013 4:55:00 PM) (top)
- 00:40, 6 November 2013 (diff | hist) . . (+130) . . User:Kdahlquist (→GOA: salmonella goa file linked)
- 00:39, 6 November 2013 (diff | hist) . . (+66) . . N File:69.S typhimurium ATCC 700720 20131105.goa (GOA file for Salmonella typhimurium version 10/15/2013 4:23:00 PM) (top)
- 00:39, 6 November 2013 (diff | hist) . . (+102) . . User:Kdahlquist (→GOA: download link for salmonella)
- 00:37, 6 November 2013 (diff | hist) . . (+123) . . User:Kdahlquist (→GOA: link to Pseudomonas file)
- 00:36, 6 November 2013 (diff | hist) . . (+66) . . N File:36.P aeruginosa LMG 12228 20131105.goa (GOA file for Pseudomonas aeruginosa version 10/15/2013 3:21:00 PM) (top)
- 00:35, 6 November 2013 (diff | hist) . . (+101) . . User:Kdahlquist (→GOA: download link for pseudomonas)
- 00:33, 6 November 2013 (diff | hist) . . (+105) . . User:Kdahlquist (→GOA: link to P falciparum goa file)
- 00:32, 6 November 2013 (diff | hist) . . (+60) . . N File:493.P falciparum 20131105.goa (GOA for Plasmodium falciparum version 10/15/2013 3:05:00 PM) (top)
- 00:31, 6 November 2013 (diff | hist) . . (+91) . . User:Kdahlquist (→GOA: download link for P falciparum)
- 00:27, 6 November 2013 (diff | hist) . . (+272) . . Talk:Chlamydia trachomatis (→Additional Week 10 Notes: need to match IDs)
- 00:26, 6 November 2013 (diff | hist) . . (+523) . . Talk:Chlamydia trachomatis (→Week 10 Feedback: note about strains and taxonomic IDs)
- 00:20, 6 November 2013 (diff | hist) . . (+107) . . User:Kdahlquist (→GOA: link to msmeg goa file)
- 00:19, 6 November 2013 (diff | hist) . . (+54) . . N File:25827.M smegmatis 20131105.goa (Mycobacterium smegmatis goa from 10/15/2013 1:48:00 PM) (top)
- 00:18, 6 November 2013 (diff | hist) . . (+92) . . User:Kdahlquist (→GOA: download link for Msmeg goa)
- 18:26, 5 November 2013 (diff | hist) . . (+46) . . GenMAPP User (→Guild Members: added guild members)
- 17:25, 5 November 2013 (diff | hist) . . (0) . . Week 11 (→Team Journal Club Presentation: fixed due dates)
- 17:25, 5 November 2013 (diff | hist) . . (-24) . . Week 11 (changed due date; removed under construction)
- 17:06, 5 November 2013 (diff | hist) . . (+185) . . Talk:Streptococcus pneumoniae (note that Sanchez paper approved)
- 00:11, 5 November 2013 (diff | hist) . . (+74) . . Talk:Sinorhizobium meliloti (approval of Dominquez-Ferraras paper) (top)
- 00:08, 5 November 2013 (diff | hist) . . (+210) . . N Talk:Sinorhizobium meliloti (where is genome paper?)
- 23:34, 4 November 2013 (diff | hist) . . (+673) . . Talk:Leishmania major (→Week 10 Feedback: microarray paper feedback) (top)
- 23:30, 4 November 2013 (diff | hist) . . (+384) . . Talk:Leishmania major (→Week 10 Feedback: genome article feedback)
- 23:26, 4 November 2013 (diff | hist) . . (+205) . . Talk:Leishmania major (→Week 10 Feedback: template and category)
- 23:24, 4 November 2013 (diff | hist) . . (+106) . . Talk:Leishmania major (→Week 10 Feedback: article page had late edites)
- 22:50, 4 November 2013 (diff | hist) . . (+132) . . Talk:Leishmania major (→Week 10 Feedback: no contribution from Lena this week)
- 22:49, 4 November 2013 (diff | hist) . . (+257) . . N Talk:Leishmania major (began week 10 feedback)
- 22:44, 4 November 2013 (diff | hist) . . (+106) . . Talk:Chlamydia trachomatis (note to comment out microarray references not used)
- 22:42, 4 November 2013 (diff | hist) . . (+110) . . Talk:Chlamydia trachomatis (note about bio/tech replicates)
- 22:41, 4 November 2013 (diff | hist) . . (+1,148) . . Talk:Chlamydia trachomatis (feedback for week 10)
- 23:13, 1 November 2013 (diff | hist) . . (+193) . . N Talk:Chlamydia trachomatis (link to comparative genomics paper for serovar A vs D/UW-3/CX)
- 22:07, 31 October 2013 (diff | hist) . . (+54) . . N File:23.H pylori 26695 20131031.goa (GOA file for H. pylori version 10/15/2013 11:52:00 AM) (top)
- 22:06, 31 October 2013 (diff | hist) . . (+2) . . User:Kdahlquist (→GOA: fixed formatting of link)
- 22:06, 31 October 2013 (diff | hist) . . (+222) . . User:Kdahlquist (→GOA: links for H pylori)
- 22:04, 31 October 2013 (diff | hist) . . (+229) . . User:Kdahlquist (→GOA: dowload links for e coli)
- 22:02, 31 October 2013 (diff | hist) . . (+62) . . User:Kdahlquist (→GOA: version info for e coli goa files)
- 22:01, 31 October 2013 (diff | hist) . . (+137) . . User:Kdahlquist (→GOA: clarification old goa for e coli)
- 22:00, 31 October 2013 (diff | hist) . . (+134) . . User:Kdahlquist (→GOA: clarification of arabidopsis goa filename)
- 21:58, 31 October 2013 (diff | hist) . . (0) . . User:Kdahlquist (→GOA)
- 21:57, 31 October 2013 (diff | hist) . . (+16) . . N File:18.E coli MG1655 20131031.goa (E. coli GOA file) (top)
- 21:57, 31 October 2013 (diff | hist) . . (+72) . . User:Kdahlquist (→GOA: second link to E. coli goa file)
- 21:56, 31 October 2013 (diff | hist) . . (+102) . . N File:313660.E coli 20131031.goa (E. coli GOA 10/15/2013 10:50:00 AM not sure whether this one or other one uploaded is right one to use) (top)
- 21:46, 31 October 2013 (diff | hist) . . (+172) . . User:Kdahlquist (→GOA: e coli)
- 21:43, 31 October 2013 (diff | hist) . . (+463) . . User:Kdahlquist (→Gene Database Source Files: put in list of species for GOA)
- 21:41, 31 October 2013 (diff | hist) . . (+18) . . User:Kdahlquist (→GOA: link to arabidopsis)
- 21:40, 31 October 2013 (diff | hist) . . (+58) . . N File:217288.A thaliana 20131031.goa (GOA for Arabidopsis thaliana version 10/15/2013 6:54:00 AM) (top)
- 21:40, 31 October 2013 (diff | hist) . . (+6) . . User:Kdahlquist (→GOA: fixed media link for mtb)
- 21:39, 31 October 2013 (diff | hist) . . (0) . . File:30.M tuberculosis ATCC 25618 20131031.goa (Kdahlquist uploaded a new version of "File:30.M tuberculosis ATCC 25618 20131031.goa") (top)
- 21:34, 31 October 2013 (diff | hist) . . (+9) . . User:Kdahlquist (→GOA: fixed link to mtb file)
- 21:33, 31 October 2013 (diff | hist) . . (+3) . . User:Kdahlquist (→GOA: replaced mtb with renamed file)
- 21:32, 31 October 2013 (diff | hist) . . (+65) . . N File:30.M tuberculosis ATCC 25618 20131031.goa (Mycobacterium tuberculosis GOA file version 10/15/2013 1:50:00 PM)
- 21:31, 31 October 2013 (diff | hist) . . (+208) . . User:Kdahlquist (→GOA: arabidopsis)
- 21:28, 31 October 2013 (diff | hist) . . (+111) . . User:Kdahlquist (→GOA: link to file and version info)
- 21:26, 31 October 2013 (diff | hist) . . (+164) . . User:Kdahlquist (→Gene Database Source Files: mtb goa download link)
- 21:23, 31 October 2013 (diff | hist) . . (+80) . . User:Kdahlquist (→UniProt XML: clarified Mtb strain info)
- 21:21, 31 October 2013 (diff | hist) . . (+80) . . User:Kdahlquist (→UniProt XML: changed vibio download page to more specific page and gave strain info)
- 21:19, 31 October 2013 (diff | hist) . . (+17) . . User:Kdahlquist (→UniProt XML: mrsa info)
- 21:19, 31 October 2013 (diff | hist) . . (+39) . . User:Kdahlquist (→UniProt XML: salmonella strain info)
- 21:18, 31 October 2013 (diff | hist) . . (+54) . . User:Kdahlquist (→UniProt XML: p aerugenosa strain info)
- 21:18, 31 October 2013 (diff | hist) . . (+114) . . User:Kdahlquist (→UniProt XML: p falciparum download page)
- 21:16, 31 October 2013 (diff | hist) . . (+145) . . User:Kdahlquist (→UniProt XML: smegmatis download link)
- 21:15, 31 October 2013 (diff | hist) . . (-2) . . User:Kdahlquist (→UniProt XML: removed extra ])
- 21:15, 31 October 2013 (diff | hist) . . (+113) . . User:Kdahlquist (→UniProt XML: helicobacter pylori download link)
- 21:14, 31 October 2013 (diff | hist) . . (+110) . . User:Kdahlquist (→UniProt XML: e coli download link)
- 21:13, 31 October 2013 (diff | hist) . . (+112) . . User:Kdahlquist (→UniProt XML: download link for arabidopsis)
- 21:12, 31 October 2013 (diff | hist) . . (-22) . . Main Page (→Class Locations: deleted old)
- 21:12, 31 October 2013 (diff | hist) . . (-257) . . Main Page (→Seminars and Events: deleted old, added new 11/21)
- 17:57, 31 October 2013 (diff | hist) . . (+3) . . User:Kdahlquist (→UniProt XML: formatted bullets)
- 17:56, 31 October 2013 (diff | hist) . . (+110) . . User:Kdahlquist (→UniProt XML: link to download page for Mtb)
- 17:56, 31 October 2013 (diff | hist) . . (+133) . . User:Kdahlquist (→UniProt XML: link to Mtb file)
- 17:55, 31 October 2013 (diff | hist) . . (+38) . . N File:Mycobacterium tuberculosis UniProt 20131031.xml.gz (Mycobacterium tuberculosis UniProt XML) (top)
- 17:51, 31 October 2013 (diff | hist) . . (+107) . . User:Kdahlquist (→UniProt XML: link to staph file)
- 17:51, 31 October 2013 (diff | hist) . . (+33) . . N File:Staphylococcus aureus UniProt 20131031.xml.gz (Staphylococcus aureus UniProt XML) (top)
- 17:50, 31 October 2013 (diff | hist) . . (+111) . . User:Kdahlquist (→UniProt XML: link to staph download page)
- 17:36, 31 October 2013 (diff | hist) . . (+296) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: changed instruction to not download data this week) (top)
- 17:16, 31 October 2013 (diff | hist) . . (+109) . . User:Kdahlquist (→UniProt XML: link to salmonella file)
- 17:15, 31 October 2013 (diff | hist) . . (+34) . . N File:Salmonella typhimurium UniProt 20131031.xml.gz (Salmonella typhimurium UniProt XML) (top)
- 17:14, 31 October 2013 (diff | hist) . . (+111) . . User:Kdahlquist (→UniProt XML: link to salmonella download page)
- 17:12, 31 October 2013 (diff | hist) . . (+113) . . User:Kdahlquist (→UniProt XML: link to P aerugenosa download page)
- 17:11, 31 October 2013 (diff | hist) . . (+108) . . User:Kdahlquist (→UniProt XML: link to P aerugenosa XML)
- 17:11, 31 October 2013 (diff | hist) . . (+34) . . N File:Pseudomonas aerugenosa UniProt 20131031.xml.gz (Pseudomonas aerugenosa UniProt XML) (top)
- 17:10, 31 October 2013 (diff | hist) . . (-23) . . User:Kdahlquist (→UniProt XML: corrected P falciparum and P aerugenosa ID (my mistake))
- 17:08, 31 October 2013 (diff | hist) . . (+24) . . User:Kdahlquist (→UniProt XML: plasmodium tax ID change?)
- 17:03, 31 October 2013 (diff | hist) . . (+107) . . User:Kdahlquist (→UniProt XML: link to plasmodium file)
- 17:02, 31 October 2013 (diff | hist) . . (+33) . . N File:Plasmodium falciparum UniProt 20131031.xml.gz (Plasmodium falciparum UniProt XML) (top)
- 17:00, 31 October 2013 (diff | hist) . . (+97) . . User:Kdahlquist (→UniProt XML: link to E. coli file)
- 17:00, 31 October 2013 (diff | hist) . . (+36) . . N File:Escherichia coli UniProt 20131031.xml.gz (E. coli K12 UniProt XML tax ID 83333) (top)
- 16:59, 31 October 2013 (diff | hist) . . (+105) . . User:Kdahlquist (→UniProt XML: link to arabidopsis file)
- 16:57, 31 October 2013 (diff | hist) . . (+23) . . N File:Arabidopsis thaliana UniProt 20131031.xml.gz (Arabidopsis UniProt XML) (top)
- 16:28, 31 October 2013 (diff | hist) . . (+46) . . Main Page (→Class Locations: added up to 11/14)
- 21:40, 29 October 2013 (diff | hist) . . (+111) . . User:Kdahlquist (→UniProt XML: link to M smeg file)
- 21:39, 29 October 2013 (diff | hist) . . (+11) . . N File:Mycobacterium smegmatis UniProt 20131029.xml.gz (UniProt XML) (top)
- 21:33, 29 October 2013 (diff | hist) . . (+206) . . User:Kdahlquist (→UniProt XML: filled in tax ID for most)
- 21:30, 29 October 2013 (diff | hist) . . (+71) . . User:Kdahlquist (→UniProt XML: added tax ID for H pylori)
- 21:29, 29 October 2013 (diff | hist) . . (+101) . . User:Kdahlquist (→UniProt XML: h pylori link)
- 21:28, 29 October 2013 (diff | hist) . . (+11) . . N File:Helicobacter pylori UniProt 20131029.xml.gz (UniProt XML) (top)
- 21:28, 29 October 2013 (diff | hist) . . (+1) . . User:Kdahlquist (→= UniProt XML: fixed header)
- 21:28, 29 October 2013 (diff | hist) . . (+70) . . User:Kdahlquist (→Gene Database Source Files: date of UniProt proteome sets)
- 21:17, 29 October 2013 (diff | hist) . . (+277) . . User:Kdahlquist (→Gene Database Source Files: listed species)
- 21:14, 29 October 2013 (diff | hist) . . (+36) . . User:Kdahlquist (new section for gene database source files)
- 21:13, 29 October 2013 (diff | hist) . . (-44) . . Main Page (→Class Locations: deleted old locations)
- 21:13, 29 October 2013 (diff | hist) . . (-384) . . Main Page (→Seminars and Events: deleted old seminars)
- 16:48, 24 October 2013 (diff | hist) . . (+26) . . Main Page (→Guilds: organized as table instead of bullets)
- 16:47, 24 October 2013 (diff | hist) . . (+25) . . Main Page (→Teams: organized as table instead of bullets)
- 16:43, 24 October 2013 (diff | hist) . . (+169) . . Main Page (→Group Projects: added links to all project pages)
- 16:40, 24 October 2013 (diff | hist) . . (+24) . . Main Page (→Teams: added new header for group projects)
- 16:39, 24 October 2013 (diff | hist) . . (+24) . . Gene Database Project Report Guidelines (added under construction template)
- 16:38, 24 October 2013 (diff | hist) . . (+29) . . Week 15 (Category: Group Projects)
- 16:37, 24 October 2013 (diff | hist) . . (+29) . . Week 13 (Category: Group Projects)
- 16:37, 24 October 2013 (diff | hist) . . (+29) . . Week 12 (Category: Group Projects)
- 16:37, 24 October 2013 (diff | hist) . . (+30) . . Week 11 (Category: Group Projects)
- 16:36, 24 October 2013 (diff | hist) . . (+30) . . Week 10 (added category Group Projects)
- 16:34, 24 October 2013 (diff | hist) . . (+28) . . Week 10 (→Creating a Team Wiki Page: linked to group project page)
- 16:33, 24 October 2013 (diff | hist) . . (+224) . . Week 10 (→Creating a Team Wiki Page: instruction to choose project manager for team)
- 16:30, 24 October 2013 (diff | hist) . . (+355) . . Week 10 (→Team Membership: pasted in group membership from group projects page)
- 16:29, 24 October 2013 (diff | hist) . . (+330) . . Gene Database Project (→Groups: put in group members and role assignments)
- 16:24, 24 October 2013 (diff | hist) . . (+28) . . Main Page (→Class Locations: locations up through November 7)
- 16:22, 24 October 2013 (diff | hist) . . (+114) . . Main Page (created section and placeholder links for teams)
- 20:53, 22 October 2013 (diff | hist) . . (+19) . . Main Page (→Seminars and Events: added time and location for 11/19 seminar)
- 20:52, 22 October 2013 (diff | hist) . . (+599) . . Main Page (→Seminars and Events: added additional Bio dept seminars)
- 15:44, 22 October 2013 (diff | hist) . . (-839) . . Main Page (→Announcements: removed old announcements; added poster session for 10/31)
- 19:43, 18 October 2013 (diff | hist) . . (+28) . . GenMAPP User (→Future Milestones: note that outline useful for final presentation also)
- 19:42, 18 October 2013 (diff | hist) . . (+96) . . GenMAPP User (→Milestone 1: note about citation and copyright)
- 19:40, 18 October 2013 (diff | hist) . . (0) . . Project Manager (→Milestone 1: fixed link to week 15 assignment)
- 19:38, 18 October 2013 (diff | hist) . . (+32) . . N File:ProjectWorkflow.jpg (new version without Integr8 logo) (top)
- 19:35, 18 October 2013 (diff | hist) . . (+17) . . N File:Vibrio schema 20101022.zip (unzips to ai file) (top)
- 19:33, 18 October 2013 (diff | hist) . . (+32) . . N File:ReadMe Vc-Std External 20101022.zip (unzips to .doc version of readme) (top)
- 19:28, 18 October 2013 (diff | hist) . . (-4) . . Gene Database Project (→Overall Flow: fixed link to GO)
- 19:27, 18 October 2013 (diff | hist) . . (-3) . . Gene Database Project (→Overall Flow: tweaked wording of GO)
- 19:26, 18 October 2013 (diff | hist) . . (-55) . . Gene Database Project (→Overall Flow: removed reference to integr8)
- 19:26, 18 October 2013 (diff | hist) . . (-68) . . Gene Database Project (→Overall Flow: removed reference to integr8)
- 19:25, 18 October 2013 (diff | hist) . . (-1) . . Gene Database Project (→Project Milestones: changed "moved to" to "are found")
- 19:24, 18 October 2013 (diff | hist) . . (+7) . . Gene Database Project (→Roles (Guilds): commented out note on election of project manager until we decide that is what is going to happen)
- 19:24, 18 October 2013 (diff | hist) . . (+47) . . Gene Database Project (→Team Journal Entries: added week 10 to list)
- 19:22, 18 October 2013 (diff | hist) . . (+53) . . Gene Database Project (→Group: added gene database testing report)
- 19:19, 18 October 2013 (diff | hist) . . (+25) . . Week 15 (added Category:Assignment)
- 19:19, 18 October 2013 (diff | hist) . . (+26) . . Week 13 (added Category:Assignment)
- 19:19, 18 October 2013 (diff | hist) . . (+25) . . Week 12 (added Category:Assignment)
- 19:17, 18 October 2013 (diff | hist) . . (+68) . . N Category:Group Projects (created category page) (top)
- 19:17, 18 October 2013 (diff | hist) . . (+30) . . Coder (added category for group projects)
- 19:16, 18 October 2013 (diff | hist) . . (+29) . . Quality Assurance (category group projects)
- 19:16, 18 October 2013 (diff | hist) . . (+29) . . GenMAPP User (added category for group projects)
- 19:15, 18 October 2013 (diff | hist) . . (+29) . . Project Manager (added category group projects)
- 19:14, 18 October 2013 (diff | hist) . . (+29) . . Gene Database Project Report Guidelines (added category for group projects)
- 19:14, 18 October 2013 (diff | hist) . . (+29) . . Gene Database Project (created category for group projects)
- 19:12, 18 October 2013 (diff | hist) . . (+113) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: note that doing journal club on week 11 assignment)
- 19:06, 18 October 2013 (diff | hist) . . (+454) . . Week 11 (→Preparation for Journal Club on Your Species: put in preamble about what journal club is)
- 19:05, 18 October 2013 (diff | hist) . . (+1,160) . . Week 15 (pasted in individual instructions from week 12)
- 19:04, 18 October 2013 (diff | hist) . . (+1,160) . . Week 13 (pasted in individual instructions from week 12)
- 18:52, 18 October 2013 (diff | hist) . . (0) . . Week 11 (moved team journal assignment to bottom of page)
- 18:50, 18 October 2013 (diff | hist) . . (+1,266) . . Week 11 (→Team Journal Club Presentation: finished instructions)
- 18:45, 18 October 2013 (diff | hist) . . (+60) . . Week 11 (→Journal Club on Your Species: edited outline instructions, created separate header for oral presentation)
- 18:40, 18 October 2013 (diff | hist) . . (+25) . . Template:Individual Journal Instructions (→Individual Journal Assignment: added category "Assignment") (top)
- 18:39, 18 October 2013 (diff | hist) . . (+281) . . Week 10 (→Creating a Team Wiki Page: create category and template)
- 18:37, 18 October 2013 (diff | hist) . . (+431) . . Week 11 (added note about grading/points; commented out option to add to week 10 page)
- 18:31, 18 October 2013 (diff | hist) . . (-24) . . Week 10 (removed under construction flag)
- 18:29, 18 October 2013 (diff | hist) . . (+443) . . Week 10 (added note on points for individual (25) and team (10) portions of the assignment)
- 18:24, 18 October 2013 (diff | hist) . . (+23) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: added answering questions for each paper on team site)
- 18:23, 18 October 2013 (diff | hist) . . (+124) . . Week 10 (→Creating a Team Wiki Page: task to list papers for bibliography assignment)
- 18:20, 18 October 2013 (diff | hist) . . (+730) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: clarified instructions of how many papers to find)
- 18:15, 18 October 2013 (diff | hist) . . (+103) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: changed question for prospective search)
- 18:09, 18 October 2013 (diff | hist) . . (-1,721) . . Week 11 (→Performing Quality Assurance on the Vibrio cholerae Gene Database: removed section and moved to week 9)
- 18:09, 18 October 2013 (diff | hist) . . (+125) . . Week 9 (→Exporting and Quality-Checking a Vibrio cholerae Gene Database: added transition to new section) (top)
- 18:07, 18 October 2013 (diff | hist) . . (-430) . . Week 9 (→Performing Quality Assurance on the Vibrio cholerae Gene Database: tweaked instructions)
- 18:06, 18 October 2013 (diff | hist) . . (+1,721) . . Week 9 (→Exporting and Quality-Checking a Vibrio cholerae Gene Database: pasted in instructions from week 11)
- 18:05, 18 October 2013 (diff | hist) . . (+27) . . Week 11 (changed due date)
- 18:04, 18 October 2013 (diff | hist) . . (+29) . . Main Page (→Course Schedule: swapped presentations in week 11 from tuesday to thursday)
- 22:26, 17 October 2013 (diff | hist) . . (+182) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: had to save because student came for office hours)
- 22:23, 17 October 2013 (diff | hist) . . (+1,172) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: revising and organizing instructions)
- 22:09, 17 October 2013 (diff | hist) . . (+350) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: more about what goes in electronic notebook)
- 20:15, 17 October 2013 (diff | hist) . . (+1,147) . . Week 10 (→Annotated Bibliography of Genomics Papers for your Species: revised format of bullets)
- 19:56, 17 October 2013 (diff | hist) . . (+1,647) . . Week 10 (moved bibliographic instructions to new header)
- 19:56, 17 October 2013 (diff | hist) . . (-1,563) . . Week 10 (→Assignment: changed header and removed bibliographic part of assignment to move it to individual task)
- 19:54, 17 October 2013 (diff | hist) . . (-10) . . Week 10 (→Assignment: removed reference to next week)
- 19:41, 17 October 2013 (diff | hist) . . (+44) . . Main Page (→Class Locations: added for weeks of October 22 and 29)
- 19:28, 17 October 2013 (diff | hist) . . (+259) . . Gene Database Testing Report Sample (→OriginalRowCounts Comparison: note to use 2010 Vibrio database for the week 9 assignment) (top)
- 19:12, 17 October 2013 (diff | hist) . . (-5) . . Running GenMAPP Builder (→Checking the Quality of your Exported Gene Database: changed language from "it's a good idea..." to ''you need to...")
- 19:09, 17 October 2013 (diff | hist) . . (+5) . . Running GenMAPP Builder (→Checking the Quality of your Exported Gene Database: put in correct link to gene database testing report sample)
- 19:02, 17 October 2013 (diff | hist) . . (+49) . . Week 9 (moved instructions from week 10 to here)
- 18:59, 17 October 2013 (diff | hist) . . (-483) . . Week 10 (removed instructions for export to be placed in week 9)
- 18:57, 17 October 2013 (diff | hist) . . (+81) . . Running GenMAPP Builder (→Pre-requisites: note that software loaded on keck machines)
- 18:23, 17 October 2013 (diff | hist) . . (+229) . . Week 9 (→Exporting and Quality-Checking a Gene Database: link to running GenMAPP Builder page)
- 18:21, 17 October 2013 (diff | hist) . . (+238) . . Main Page (→Course Schedule: put in topic for 10/17)
- 17:30, 17 October 2013 (diff | hist) . . (0) . . Week 9 (fixed shared instructions to week = 9)
- 17:29, 17 October 2013 (diff | hist) . . (-204) . . Week 9 (removed old reference to microarray analysis)
- 17:27, 17 October 2013 (diff | hist) . . (+1) . . Week 9 (→Project Team Requests: fixed link for Stanford microarray database)
- 17:26, 17 October 2013 (diff | hist) . . (+82) . . Week 9 (→Project Team Requests: added link to GOA)
- 17:25, 17 October 2013 (diff | hist) . . (+18) . . Week 9 (→Project Team Requests: fixed link for proteome downloads)
- 17:21, 17 October 2013 (diff | hist) . . (+134) . . Week 9 (→Project Team Requests: put in potential species)
- 23:42, 15 October 2013 (diff | hist) . . (+197) . . Main Page (→Seminars and Events: added Bellarmine Forum event)
- 16:18, 15 October 2013 (diff | hist) . . (+22) . . Main Page (→Class Locations: put in class locations for next week)
- 23:19, 14 October 2013 (diff | hist) . . (+292) . . Main Page (→Announcements: note about feedback for week 8 interim assignment)
- 23:17, 14 October 2013 (diff | hist) . . (+236) . . User talk:Ksherbina (gave week 8 interim feedback)
- 23:14, 14 October 2013 (diff | hist) . . (+629) . . User talk:Dwilliams (completed week 8 feedback)
- 23:10, 14 October 2013 (diff | hist) . . (+236) . . User talk:Kmeilak (gave week 8 interim feedback)
- 23:07, 14 October 2013 (diff | hist) . . (+102) . . User talk:Kevinmcgee (→Week 8 Interim Feedback: note to make corrections)
- 23:06, 14 October 2013 (diff | hist) . . (+933) . . User talk:Kevinmcgee (completed week 8 interim feedback)
- 23:06, 14 October 2013 (diff | hist) . . (+17) . . User talk:Vkuehn (→Week 8 Interim Feedback: fixed wiki syntax)
- 22:53, 14 October 2013 (diff | hist) . . (+514) . . User talk:Mmalefyt (gave week 8 interim feedback)
- 22:49, 14 October 2013 (diff | hist) . . (+191) . . User talk:Slouie (note that week 8 files OK to go)
- 22:47, 14 October 2013 (diff | hist) . . (+657) . . User talk:Vkuehn (gave week 8 interim feedback)
- 22:43, 14 October 2013 (diff | hist) . . (+322) . . User talk:Ajvree (→Week 8 Feedback: note on filename)
- 22:41, 14 October 2013 (diff | hist) . . (+367) . . User talk:Mpetredi (→Week 8 Interim Feedback: note about filename)
- 22:39, 14 October 2013 (diff | hist) . . (+337) . . User talk:Gleis (→Week 8 Interim Feedback: added note about filename conventions)
- 22:37, 14 October 2013 (diff | hist) . . (+231) . . User talk:Lena (→Week 8 Interim Feedback: added note about filename)
- 22:28, 14 October 2013 (diff | hist) . . (+257) . . User talk:Ajvree (added week 8 interim feedback: good to go)
- 22:27, 14 October 2013 (diff | hist) . . (+257) . . User talk:HDelgadi (week 8 interim feedback: good to go)
- 22:21, 14 October 2013 (diff | hist) . . (+997) . . User talk:Lena (→Week 8 Interim Feedback: noted corrections needed to spreadsheet)
- 22:07, 14 October 2013 (diff | hist) . . (+31) . . User talk:Lena (started section for Week 8 interim feedback)
- 22:02, 14 October 2013 (diff | hist) . . (+235) . . User talk:Mpetredi (week 8 interim feedback, files OK)
- 21:59, 14 October 2013 (diff | hist) . . (+284) . . User talk:Gleis (→Week 8 Feedback: note about syntax for downloading file)
- 21:51, 14 October 2013 (diff | hist) . . (+653) . . User talk:Gleis (note that week 8 xls file has errors)
- 16:59, 14 October 2013 (diff | hist) . . (+279) . . User talk:Taur.vil (note need to upload files from part 1 week 8)
- 22:08, 11 October 2013 (diff | hist) . . (+198) . . Main Page (→Grades Posted: added note about week 2 redux)
- 22:04, 11 October 2013 (diff | hist) . . (+301) . . User talk:Kevinmcgee (→Week 2 Feedback: follow-up)
- 22:03, 11 October 2013 (diff | hist) . . (+298) . . User talk:Laurmagee (→Week 2 Feedback: follow-up)
- 22:02, 11 October 2013 (diff | hist) . . (+325) . . User talk:Vkuehn (→Week 2 Journal Feedback: follow-up)
- 22:01, 11 October 2013 (diff | hist) . . (+242) . . User talk:Dwilliams (→Week 2 Feedback: follow-up)
- 22:00, 11 October 2013 (diff | hist) . . (+242) . . User talk:Mmalefyt (→Week 2 Feedback: follow-up)
- 21:59, 11 October 2013 (diff | hist) . . (+182) . . User talk:Ajvree (→Week 2 Feedback: follow-up)
- 21:59, 11 October 2013 (diff | hist) . . (+182) . . User talk:Ksherbina (→Week 2 Feedback: follow-up)
- 21:58, 11 October 2013 (diff | hist) . . (+182) . . User talk:Kmeilak (→Week 2 Feedback: follow-up added)
- 21:58, 11 October 2013 (diff | hist) . . (+182) . . User talk:Slouie (→Week 2 Feedback: added follow-up)
- 21:58, 11 October 2013 (diff | hist) . . (+182) . . User talk:Gleis (→Week 2 Feedback: added follow-up feedback)
- 21:57, 11 October 2013 (diff | hist) . . (+182) . . User talk:Lena (→Week 2 Feedback: gave follow-up feedback)
- 21:56, 11 October 2013 (diff | hist) . . (+213) . . User talk:HDelgadi (→Week 2 Follow-up: added feedback)
- 21:55, 11 October 2013 (diff | hist) . . (+26) . . User talk:HDelgadi (→Week 2 Journal Feedback: section for week 2 follow up)
- 21:26, 11 October 2013 (diff | hist) . . (+333) . . Main Page (→Announcements: grades posted for week 5 database wiki and week 6)
- 21:22, 11 October 2013 (diff | hist) . . (+838) . . User talk:HDelgadi (→Week 5 Feedback: gave feedback on the database wiki page)
- 21:22, 11 October 2013 (diff | hist) . . (+834) . . User talk:Mpetredi (→Week 5 Feedback: gave feedback on database wiki)
- 21:19, 11 October 2013 (diff | hist) . . (+403) . . User talk:Lena (→Week 5 Feedback: gave feedback on database wiki)
- 21:18, 11 October 2013 (diff | hist) . . (+403) . . User talk:Mmalefyt (→Week 5 Feedback: gave feedback on database wiki)
- 21:18, 11 October 2013 (diff | hist) . . (+403) . . User talk:Taur.vil (→Week 5 Feedback: completed feedback for database wiki)
- 21:16, 11 October 2013 (diff | hist) . . (+480) . . User talk:Vkuehn (→Week 5 Feedback: completed database wiki feedback)
- 21:15, 11 October 2013 (diff | hist) . . (+479) . . User talk:Kevinmcgee (→Week 5 Feedback: completed feedback)
- 21:12, 11 October 2013 (diff | hist) . . (+431) . . User talk:Gleis (→Week 5 Feedback: completed feedback)
- 21:11, 11 October 2013 (diff | hist) . . (+325) . . User talk:Ksherbina (→Week 5 Feedback: completed feedback)
- 21:09, 11 October 2013 (diff | hist) . . (+799) . . User talk:Slouie (→Database Wiki Feedback: completed feedback)
- 21:08, 11 October 2013 (diff | hist) . . (+32) . . User talk:Slouie (→Week 5 Feedback: started section for db wiki feedback)
- 21:08, 11 October 2013 (diff | hist) . . (+673) . . User talk:Ajvree (→Week 5 Feedback: completed week 5 feedback)
- 21:05, 11 October 2013 (diff | hist) . . (+481) . . User talk:Kmeilak (→Week 5 Database Wiki: completed feedback)
- 21:03, 11 October 2013 (diff | hist) . . (+30) . . User talk:Kmeilak (→Week 5 Feedback: started section for week 5 database wiki)
- 21:02, 11 October 2013 (diff | hist) . . (+232) . . User talk:Laurmagee (→Week 5 Feedback: note that week 5 database wiki is missing)
- 21:01, 11 October 2013 (diff | hist) . . (-1) . . m User talk:Dwilliams (→= Week 5 Database Wiki: fixed formatting)
- 21:01, 11 October 2013 (diff | hist) . . (+233) . . User talk:Dwilliams (→Week 5 Feedback: noted that week 5 database wiki is missing)
- 17:40, 11 October 2013 (diff | hist) . . (+11) . . Talk:Gene Database Project (→Potential Species for Projects: leishmania is eukaryote) (top)
- 17:40, 11 October 2013 (diff | hist) . . (+12) . . Talk:Gene Database Project (→Potential Species for Projects: leishmania has ~8000 genes)
- 17:39, 11 October 2013 (diff | hist) . . (-1) . . m Talk:Gene Database Project (→Potential Species for Projects: fixed spelling)
- 17:39, 11 October 2013 (diff | hist) . . (+246) . . Talk:Gene Database Project (added Leishmania)
- 17:31, 11 October 2013 (diff | hist) . . (+96) . . Talk:Gene Database Project (→Potential Species for Projects: added shigella and chlamydia)
- 17:28, 11 October 2013 (diff | hist) . . (+107) . . Talk:Gene Database Project (→Potential Species for Projects: shigella flexneri)
- 17:25, 11 October 2013 (diff | hist) . . (+143) . . Talk:Gene Database Project (→Potential Species for Projects: added trypanosoma cruzi)
- 17:03, 11 October 2013 (diff | hist) . . (+26) . . Talk:Gene Database Project (→Potential Species for Projects: streptococcus genome paper available)
- 17:02, 11 October 2013 (diff | hist) . . (+97) . . N Talk:Gene Database Project (started list of species)
- 23:23, 8 October 2013 (diff | hist) . . (+864) . . User talk:HDelgadi (completed week 5 feedback)
- 23:22, 8 October 2013 (diff | hist) . . (+797) . . User talk:Lena (completed week 5 feedback)
- 23:20, 8 October 2013 (diff | hist) . . (+1,005) . . User talk:Vkuehn (completed week 5 feedback)
- 23:17, 8 October 2013 (diff | hist) . . (+965) . . User talk:Gleis (completed week 5 feedback)
- 23:15, 8 October 2013 (diff | hist) . . (+891) . . User talk:Slouie (completed week 5 feedback)
- 23:14, 8 October 2013 (diff | hist) . . (+134) . . User talk:Laurmagee (→Week 5 Feedback: note about wrong ID and PDF)
- 23:12, 8 October 2013 (diff | hist) . . (+832) . . User talk:Laurmagee (completed week 5 feedback)
- 23:08, 8 October 2013 (diff | hist) . . (+1,260) . . User talk:Mmalefyt (completed week 5 feedback)
- 23:04, 8 October 2013 (diff | hist) . . (+965) . . User talk:Kevinmcgee (completed week 5 feedback)
- 23:01, 8 October 2013 (diff | hist) . . (+756) . . User talk:Kmeilak (completed week 5 feedback)
- 23:00, 8 October 2013 (diff | hist) . . (+577) . . User talk:Mpetredi (→Week 5 Feedback: completed week 5 feedback)
- 22:58, 8 October 2013 (diff | hist) . . (+179) . . User talk:Mpetredi (started section for week 5 feedback)
- 22:57, 8 October 2013 (diff | hist) . . (+373) . . User talk:Ksherbina (→Week 5 Feedback: completed week 5 feedback)
- 22:56, 8 October 2013 (diff | hist) . . (+277) . . User talk:Taur.vil (→Week 5 Feedback: note about intermediate saves)
- 22:54, 8 October 2013 (diff | hist) . . (+179) . . User talk:Ksherbina (started section for week 5 feedback)
- 22:53, 8 October 2013 (diff | hist) . . (+715) . . User talk:Taur.vil (→Week 5 Feedback: completed week 5 feedback)
- 22:50, 8 October 2013 (diff | hist) . . (+179) . . User talk:Taur.vil (started section for week 5)
- 22:49, 8 October 2013 (diff | hist) . . (+805) . . User talk:Ajvree (→Week 5 Feedback: completed week 5 feedback)
- 22:44, 8 October 2013 (diff | hist) . . (+179) . . User talk:Ajvree (started section for week 5 feedback)
- 22:43, 8 October 2013 (diff | hist) . . (+1,086) . . User talk:Dwilliams (→Week 5 Feedback: completed week 5 feedback)
- 22:37, 8 October 2013 (diff | hist) . . (+23) . . User talk:Dwilliams (started section for week 5 feedback)
- 22:32, 8 October 2013 (diff | hist) . . (+223) . . Week 8 (clarification about electronic lab notebook) (top)
- 21:47, 8 October 2013 (diff | hist) . . (+46) . . N Category:Journal Entry (added text to get rid of red link) (top)
- 21:09, 8 October 2013 (diff | hist) . . (-6) . . Main Page (→Announcements: fixed comment)
- 21:09, 8 October 2013 (diff | hist) . . (+7) . . Main Page (→Announcements: commented out course assessment announcement)
- 21:08, 8 October 2013 (diff | hist) . . (-609) . . Main Page (→Announcements: deleted postgres announcement and added GenMAPP installation)
- 21:05, 8 October 2013 (diff | hist) . . (-2) . . Week 8 (→Reflection: raised the heading level by one)
- 21:05, 8 October 2013 (diff | hist) . . (-24) . . Week 8 (removed under construction notice from assignment)
- 20:48, 8 October 2013 (diff | hist) . . (0) . . Main Page (→Course Schedule: fixed group assignments to topic instead of assignment column)
- 20:47, 8 October 2013 (diff | hist) . . (+26) . . Main Page (→Course Schedule: put group requests on 10/27 and group assignments on 10/29)
- 20:44, 8 October 2013 (diff | hist) . . (+6) . . Main Page (→Course Schedule: commented out open source culture on 10/3 because didn't get to it in class)
- 19:15, 8 October 2013 (diff | hist) . . (+1,745) . . Week 8 (→Downloading and installing the GenMAPP and MAPPFinder Software: instructions to download vibrio databases)
- 19:03, 8 October 2013 (diff | hist) . . (0) . . Week 8 (→Reflection: fixed date on Merrell paper)
- 19:02, 8 October 2013 (diff | hist) . . (+74) . . Week 8 (→MAPPFinder Analysis of Vibrio cholerae Microarray Data (Part 2): started new section on how to install GenMAPP/MAPPFinder)
- 19:01, 8 October 2013 (diff | hist) . . (+19) . . Week 8 (→Overview of Microarray Data Analysis: designated parts 1 and 2)
- 19:01, 8 October 2013 (diff | hist) . . (+104) . . Week 8 (→Overview of Microarray Data Analysis: note to which steps we are doing)
- 18:59, 8 October 2013 (diff | hist) . . (-1) . . Week 8 (removed extra blank line)
- 18:59, 8 October 2013 (diff | hist) . . (+1,800) . . Week 8 (copied overview of microarray data analysis from openwetware)
- 18:56, 8 October 2013 (diff | hist) . . (-56) . . Week 8 (→Reading: replaced doniger link to pdf to publisher full text)
- 18:55, 8 October 2013 (diff | hist) . . (+1,073) . . Week 8 (added readings and links to articles)
- 18:43, 8 October 2013 (diff | hist) . . (+1,259) . . Week 8 (rearranged sections, detailed links to protocols and clarified deadlines)
- 18:27, 8 October 2013 (diff | hist) . . (-2) . . Week 8 (→View: moved header up one level)
- 18:26, 8 October 2013 (diff | hist) . . (+1) . . Week 8 (rearranged sections on page)
- 18:25, 8 October 2013 (diff | hist) . . (+338) . . Week 8 (→Reflection: rearranged into view/reflect, revised questions)
- 18:01, 8 October 2013 (diff | hist) . . (-27) . . Main Page (→Class Locations: deleted 10/8)
- 23:39, 7 October 2013 (diff | hist) . . (+1) . . Week 8 (→Reflection: added space character)
- 23:38, 7 October 2013 (diff | hist) . . (0) . . Week 8 (→Reflection: changed hyperlink label)
- 23:38, 7 October 2013 (diff | hist) . . (+774) . . Week 8 (→Reflection: posted link to video and discussion questions)
- 22:54, 7 October 2013 (diff | hist) . . (+204) . . Main Page (→Course Schedule: link to slides on mylmuconnect for 10/8)
- 23:00, 4 October 2013 (diff | hist) . . (-57) . . Main Page (→Class Locations: deleted old class)
- 23:00, 4 October 2013 (diff | hist) . . (-212) . . Main Page (→Seminars and Events: deleted old seminar)
- 17:28, 2 October 2013 (diff | hist) . . (+96) . . Week 8 (→Reflection: commented out questions; link to materials for Duke case)
- 17:19, 2 October 2013 (diff | hist) . . (+6) . . Week 8 (→Groups: adjusted group membership)
- 17:15, 2 October 2013 (diff | hist) . . (+15) . . Main Page (→Class Locations: updated through 10/15)
- 23:29, 27 September 2013 (diff | hist) . . (+70) . . Main Page (→Course Schedule: link to xkcd comic "Significant")
- 23:28, 27 September 2013 (diff | hist) . . (+115) . . Main Page (→Course Schedule: link to dataone slides)
- 23:24, 27 September 2013 (diff | hist) . . (+114) . . Week 8 (→Groups: put in groups)
- 23:09, 27 September 2013 (diff | hist) . . (+91) . . Week 8 (clarified link to exercise and what files need to be uploaded)
- 23:08, 27 September 2013 (diff | hist) . . (+43) . . Week 8 (→Analysis of Vibrio cholerae Microarray Data Part 1: replaced red link to link to OpenWetware for part one exercise)
- 23:06, 27 September 2013 (diff | hist) . . (0) . . Main Page (→Course Schedule: included "part 1" and "part 2" in hyperline for DNA microarray activity)
- 22:58, 27 September 2013 (diff | hist) . . (-318) . . Main Page (→Seminars and Events: added Mureika seminar for 10/4)
- 19:20, 26 September 2013 (diff | hist) . . (+112) . . Some Topics to Consider When Critiquing Talks (→Visuals (Slides): link to presentation guidelines powerpoint slides) (top)
- 18:35, 26 September 2013 (diff | hist) . . (+196) . . User talk:Dondi (message to post link to postgres download)
- 18:03, 26 September 2013 (diff | hist) . . (+91) . . Main Page (→Course Schedule: put in groups presenting on 10/1 and 10/3)
- 16:48, 25 September 2013 (diff | hist) . . (-1) . . Main Page (→Course Schedule: put readings back under readings instead of topics)
- 16:47, 25 September 2013 (diff | hist) . . (-101) . . Main Page (→Course Schedule: added links to GOA and Vibrio genome sequence papers for 10/24)
- 16:32, 25 September 2013 (diff | hist) . . (-1) . . Main Page (→Course Schedule: moved Merrell reading to 10/10)
- 16:31, 25 September 2013 (diff | hist) . . (+5) . . Main Page (→Course Schedule: put in Glenn Johnson-Grau's guest lecture on 10/29)
- 16:28, 25 September 2013 (diff | hist) . . (+425) . . Talk:Main Page (proposed changes to assignment schedule) (top)
- 16:02, 25 September 2013 (diff | hist) . . (-242) . . Main Page (→Seminars and Events: deleted old seminar)
- 19:29, 24 September 2013 (diff | hist) . . (+199) . . Week 7 (→Introduction to Microarrays: note no partners for this week) (top)
- 16:54, 24 September 2013 (diff | hist) . . (+57) . . Main Page (→Course Schedule: link to Merrell article)
- 16:51, 24 September 2013 (diff | hist) . . (+46) . . Main Page (→Course Schedule: fixed name for Brown & Botstein and Doniger papers)
- 16:48, 24 September 2013 (diff | hist) . . (+34) . . Main Page (→Course Schedule: link to Ashburner GO article)
- 16:46, 24 September 2013 (diff | hist) . . (+58) . . Main Page (→Course Schedule: link to Campbell & Heyer on MyLMU Connect)
- 16:43, 24 September 2013 (diff | hist) . . (+24) . . Main Page (→Course Schedule: linked to full text on Nature Genetics site for Brown 1999)
- 21:22, 23 September 2013 (diff | hist) . . (+530) . . Main Page (→Seminars and Events: added seminar for 9/27)
- 20:17, 23 September 2013 (diff | hist) . . (+54) . . Main Page (→Course Schedule: put Hilda-Mitchell on first presentation day)
- 20:14, 19 September 2013 (diff | hist) . . (-24) . . Week 7 (assignment finalized and under construction notice removed)
- 20:14, 19 September 2013 (diff | hist) . . (+147) . . Week 7 (clarified deadlines, due one day earlier because of Autumn Day)
- 20:11, 19 September 2013 (diff | hist) . . (+12) . . Week 7 (→Answer the following Discovery Questions from Chapter 4: clarified when hard copy of graph is due)
- 20:10, 19 September 2013 (diff | hist) . . (+117) . . Week 7 (→Reflection: changed reflection questions to go with video)
- 20:07, 19 September 2013 (diff | hist) . . (+69) . . Week 7 (→View: link to 60 minutes video)
- 20:06, 19 September 2013 (diff | hist) . . (+76) . . Week 7 (→Reflection: new section for viewing video)
- 20:04, 19 September 2013 (diff | hist) . . (+14) . . Week 7 (→Introduction to Microarrays: pasted in current links to MyLMU Connect)
- 19:59, 19 September 2013 (diff | hist) . . (+62) . . Week 7 (→Answer the following Discovery Questions from Chapter 4: note about graph in hard copy or by computer)
- 19:57, 19 September 2013 (diff | hist) . . (+3,204) . . Week 7 (pasted in Campbell/Heyer assignment from OpenWetware wiki/biomath modeling class)
- 19:56, 19 September 2013 (diff | hist) . . (-2,861) . . Template:Individual Journal Instructions (Undo revision 1829 by Kdahlquist (talk))
- 19:54, 19 September 2013 (diff | hist) . . (+2,861) . . Template:Individual Journal Instructions (→Individual Journal Assignment: pasted in from OpenWetware/Biomath modeling class)
- 19:52, 19 September 2013 (diff | hist) . . (-313) . . Week 7 (commented out old assignment)
- 22:59, 18 September 2013 (diff | hist) . . (+41) . . Main Page (→Course Work and Grading: comment on info literacy regarding finding papers for project)
- 22:58, 18 September 2013 (diff | hist) . . (+11) . . Main Page (→Course Work and Grading: comments on breakdown of oral and info literacy points)
- 22:56, 18 September 2013 (diff | hist) . . (-1) . . Week 5 (removed stray comma)
- 22:55, 18 September 2013 (diff | hist) . . (+122) . . Week 5 (amended that wiki page will be graded separately for 20 points)
- 22:40, 18 September 2013 (diff | hist) . . (-24) . . Week 5 (removed under construction template)
- 22:39, 18 September 2013 (diff | hist) . . (+124) . . Week 5 (→NAR Exercise and Presentation: added in buddy assignments)
- 22:28, 18 September 2013 (diff | hist) . . (+140) . . Week 5 (→UniProt Exercise: redlink to MyLMUConnect)
- 22:22, 18 September 2013 (diff | hist) . . (-75) . . Week 5 (→Additional UniProt Resources: removed another dead link)
- 22:21, 18 September 2013 (diff | hist) . . (-4) . . Week 5 (→Additional UniProt Resources: replaced EBI link to UniProt Quick tour)
- 22:19, 18 September 2013 (diff | hist) . . (-99) . . Week 5 (→Additional UniProt Resources: removed broken video link)
- 22:14, 18 September 2013 (diff | hist) . . (-6) . . Week 5 (→Additional UniProt Resources: updated link to UniProt 2013 article in NAR)
- 22:12, 18 September 2013 (diff | hist) . . (+211) . . Week 5 (→UniProt Exercise: note on keeping an electronic notebook on journal page)
- 22:07, 18 September 2013 (diff | hist) . . (+1) . . m Week 5 (→UniProt Exercise: fixed spelling error)
- 22:04, 18 September 2013 (diff | hist) . . (-241) . . Week 5 (→UniProt Exercise: fixed link to uniprot)
- 21:56, 18 September 2013 (diff | hist) . . (+188) . . Week 5 (→UniProt Exercise: note on why uniprot)
- 19:33, 18 September 2013 (diff | hist) . . (+320) . . Some Topics to Consider When Critiquing Talks (→Speaking Style (Language and Delivery): added from rubric, reorganized)
- 19:20, 18 September 2013 (diff | hist) . . (0) . . m Some Topics to Consider When Critiquing Talks (→Organization: fixed line break)
- 19:20, 18 September 2013 (diff | hist) . . (+309) . . Some Topics to Consider When Critiquing Talks (→Organization: added details from oral communication rubric)
- 19:17, 18 September 2013 (diff | hist) . . (+393) . . Some Topics to Consider When Critiquing Talks (→Visuals (Slides): gave more details)
- 19:11, 18 September 2013 (diff | hist) . . (+129) . . Some Topics to Consider When Critiquing Talks (→Content: modified based on oral communications rubric)
- 19:06, 18 September 2013 (diff | hist) . . (+8) . . Some Topics to Consider When Critiquing Talks (→Visuals: added clarifier "slides" to header)
- 19:05, 18 September 2013 (diff | hist) . . (+24) . . Some Topics to Consider When Critiquing Talks (→Speaking Style: added clarifiers language and delivery to heading)
- 18:38, 18 September 2013 (diff | hist) . . (+1) . . Some Topics to Consider When Critiquing Talks (→Overall: fixed spelling)
- 18:37, 18 September 2013 (diff | hist) . . (+13) . . Some Topics to Consider When Critiquing Talks (→Overall: changed categories to excellent, very good, good, fair, poor)
- 18:36, 18 September 2013 (diff | hist) . . (+11) . . Week 5 (→PowerPoint Presentation: linked presentation guidelines to wiki page)
- 18:31, 18 September 2013 (diff | hist) . . (+62) . . N File:PresentationGuidelines.ppt (powerpoint presentation on how to give powerpoint presentation) (top)
- 18:27, 18 September 2013 (diff | hist) . . (+245) . . Week 5 (→NAR Exercise and Presentation: added link to reading of slides from DataONE)
- 18:25, 18 September 2013 (diff | hist) . . (+190) . . Main Page (→Course Schedule: links to DataONE slides on data management and data sharing for 9/19)
- 18:22, 18 September 2013 (diff | hist) . . (+194) . . Main Page (→Course Schedule: link to slides for 9/19)
- 17:22, 18 September 2013 (diff | hist) . . (+3) . . Week 5 (→Reflect: revised the questions)
- 18:40, 17 September 2013 (diff | hist) . . (+9) . . Main Page (→Course Schedule: modified due date for week 5)
- 17:30, 17 September 2013 (diff | hist) . . (+563) . . Week 5 (→Reflect: changed questions)
- 17:22, 17 September 2013 (diff | hist) . . (-3,069) . . Week 5 (→Reflect: list of data literacy skills ( in comment))
- 17:19, 17 September 2013 (diff | hist) . . (+4,631) . . Week 5 (→Reflect: pasted in notes from BioQuest 2011 workshop KD attended)
- 17:00, 17 September 2013 (diff | hist) . . (+384) . . Week 5 (note on grading for assignment)
- 16:53, 17 September 2013 (diff | hist) . . (+25) . . Week 5 (→Database Wiki Page: added question of when last modified)
- 16:52, 17 September 2013 (diff | hist) . . (+187) . . Week 5 (→Database Wiki Page: added list of links needed for database wiki page)
- 16:48, 17 September 2013 (diff | hist) . . (+90) . . Week 5 (→NAR Exercise and Presentation: updated links to 2013 NAR issue)
- 16:41, 17 September 2013 (diff | hist) . . (-1) . . m Week 5 (fixed tense)
- 16:40, 17 September 2013 (diff | hist) . . (+477) . . Week 5 (modified due dates)
- 16:21, 17 September 2013 (diff | hist) . . (-98) . . Main Page (→Course Schedule: organized topics for genome/intro to biol db)
- 16:19, 17 September 2013 (diff | hist) . . (+152) . . Template:Shared Journal Instructions (→Shared Journal Assignment: note about using templage) (top)
- 16:17, 17 September 2013 (diff | hist) . . (+144) . . Template:Individual Journal Instructions (→Individual Journal Assignment: added note about using template)
- 16:12, 17 September 2013 (diff | hist) . . (-26) . . Main Page (→Course Schedule: linked to slides shown in class on MyLMUConnect for 9/5)
- 23:16, 12 September 2013 (diff | hist) . . (+234) . . Main Page (→Seminars and Events: added another bioethics seminar)
- 23:13, 12 September 2013 (diff | hist) . . (+155) . . Main Page (→Course Schedule: fixed Moody chapter 6 redlink)
- 16:20, 12 September 2013 (diff | hist) . . (+161) . . User talk:Ajvree (note that I answered question on my user talk page.)
- 16:19, 12 September 2013 (diff | hist) . . (+160) . . User talk:Ksherbina (note that I answered question on my user talk page)
- 16:18, 12 September 2013 (diff | hist) . . (+161) . . User talk:Mpetredi (note that I answered question on my talk page)
- 16:15, 12 September 2013 (diff | hist) . . (+161) . . User talk:Kevinmcgee (note that I answered question on my user talk page)
- 16:14, 12 September 2013 (diff | hist) . . (+161) . . User talk:Mmalefyt (note that I answered question on user talk page)
- 16:12, 12 September 2013 (diff | hist) . . (+160) . . User talk:Laurmagee (note that I answered question on user talk page)
- 16:12, 12 September 2013 (diff | hist) . . (+159) . . User talk:Slouie (note that I answered question on my talk page)
- 16:08, 12 September 2013 (diff | hist) . . (+723) . . User talk:Kdahlquist (answered Lauren's question) (top)
- 22:47, 11 September 2013 (diff | hist) . . (+587) . . User talk:Kdahlquist (answered Mitchell's question)
- 22:21, 11 September 2013 (diff | hist) . . (+1,546) . . User talk:Dwilliams (→Week 2 Feedback: completed week 2 feedback)
- 22:16, 11 September 2013 (diff | hist) . . (+23) . . User talk:Dwilliams (started section on week 2 feedback)
- 22:15, 11 September 2013 (diff | hist) . . (+690) . . User talk:Ajvree (→Week 2 Feedback: completed week 2 feedback)
- 22:12, 11 September 2013 (diff | hist) . . (+23) . . User talk:Ajvree (started section for week 2 feedback)
- 22:11, 11 September 2013 (diff | hist) . . (+260) . . User talk:Taur.vil (→Week 2 Feedback: completed week 2 feedback)
- 22:09, 11 September 2013 (diff | hist) . . (+136) . . User talk:Taur.vil (started week 2 feedback)
- 22:08, 11 September 2013 (diff | hist) . . (+559) . . User talk:Ksherbina (→Week 2 Feedback: completed week 2 feedback)
- 22:06, 11 September 2013 (diff | hist) . . (+23) . . User talk:Ksherbina (started section for week 2 feedback)
- 22:05, 11 September 2013 (diff | hist) . . (+519) . . User talk:Mpetredi (completed week 2 feedback)
- 22:03, 11 September 2013 (diff | hist) . . (+1,219) . . User talk:Kmeilak (completed week 2 feedback)
- 21:54, 11 September 2013 (diff | hist) . . (+1,002) . . User talk:Kevinmcgee (→Week 2 Feedback: completed week 2 feedback)
- 21:48, 11 September 2013 (diff | hist) . . (+23) . . User talk:Kevinmcgee (started section for week 2 feedback)
- 21:47, 11 September 2013 (diff | hist) . . (+2,256) . . User talk:Mmalefyt (→Week 2 Feedback: completed week 2 feedback)
- 21:40, 11 September 2013 (diff | hist) . . (+120) . . User talk:Laurmagee (→Week 2 Feedback: note about translation)
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