Publications
Dionisio JDN, Dahlquist KD. “Improving the computer science in bioinformatics through open source pedagogy.” ACM SIGCSE Bulletin 40(2):115-119, June 2008. http://doi.acm.org/10.1145/1383602.1383648
Dahlquist KD, Dionisio JDN. “An Open Source Framework for Teaching Bioinformatics.” 8th annual Bioinformatics Open Source Conference (BOSC 2007). Vienna, Austria, July 19–20, 2007.
- Online presentation slides (Hosted by SlideShare)
Dahlquist KD, Nicholas J, Dionisio JDN. “XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources.” 8th annual Bioinformatics Open Source Conference (BOSC 2007). Vienna, Austria, July 19–20, 2007.
- Online presentation slides (Hosted by SlideShare)
Dahlquist KD, Dionisio JDN. “Collaborating Early and Often: Bringing Biology and Computer Science Together Through an Open Source Culture.” LMU Junior Faculty Seminar. Loyola Marymount University, November 14, 2006.
- Presentation slides: 4.7M PDF
Dahlquist KD, Dionisio JDN. “A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources.” 7th annual Bioinformatics Open Source Conference (BOSC 2006). Fortaleza, Brazil, August 5, 2006.
- Presentation slides: 3.6M PDF
Dahlquist KD, Barrett J, Boyle J, Carasso A, Hoffman D, Naffas B, Nicholas J, Ruiz R, Spicer S, Dionisio JDN. “A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources.” 14th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2006). Fortaleza, Brazil, August 6–10, 2006.
- Poster abstract (ISMB site)
- Poster download: 1.7M PDF